Curriculum
The track’s course work and activities will supplement those of the student’s home program. By the end of training, students will be able to:
- Perform original, basic science research on the hormonal, neuronal, and biochemical processes underlying normal metabolism and the metabolic derangements that lead to and result from disease states
- Employ cutting-edge, state-of-the-art techniques in their research projects
- Conduct critical assessments of metabolism-focused scientific literature and apply the latest findings to their own research
- Convey their research findings and the implications of their research findings to the academic community in the form of poster and oral presentations at local, national, and international settings and in the form of peer-reviewed scientific manuscripts
Course Descriptions
Metabolism Masterclass
- This seminar series will provide an intimate setting for students to interact with the many exceptional principal investigators on campus performing metabolism research.
- The lecturer of the day will lead a discussion focusing on a key paper from her/his career, during which the lecturer will reflect on the scientific process, context, and background for the study, while also reviewing the techniques used, results, and conclusions.
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Speakers in this seminar series during 2020-2021 included: Drs. Mike Brown, Helen Hobbs, Joe Takahashi, Joel Elmquist, Philipp Scherer, Lora Hooper, Steven Kliewer, and Ralph DeBerardinis.
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Speakers in this seminar series during 2021-2022 included: Drs. David Mangelsdorf, Jay Horton, Philip Shaul, Ezra Burstein, Russell Debose-Boyd, Ildiko Lingvay, and Melanie Cobb.
- Speakers in this seminar series during 2022-2023 included: Drs. Joe Goldstein, Sarah Huen, Yuh Min Chook, Josh Mendell, Lee Kraus, Kim Orth, Joachim Herz, and Nan Yan.
- Speakers in this seminar series during 2023-2024 included: Drs. Jeffrey Zigman, Maria Chahrour, Carla Green, Perry Bickel, Dayoung Oh, Andrew Zinn, Samuel McBrayer, and Kevin Williams.
- Speakers in this seminar series during 2024-2025 included: Drs. Jin Ye, Samir Parikh, Gerta Hoxhaj, Tom Carroll, Craig Malloy, Joseph Hill, and Kathryn O’Donnell.
2025-2026 Schedule |
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When/Where: 2nd Thursday of the Month, NL3.120 - 12:00PM |
Date | Speaker | Department |
09/11/2025 | Steven McKnight, Ph.D. | Internal Medicine | Neuroscience |
10/09/2025 | Jeffrey Browning, M.D. | Internal Medicine – Digestive and Liver Diseases |
11/13/2025 | Michail Agathokleous, Ph.D. | CRI |
12/22/2025 | Gerta Hoxhaj, Ph.D. | Pharmacology |
01/15/2026* | Thomas Wilkie, Ph.D. | Molecular Biology |
02/12/2026 | Peter Douglas, Ph.D. | Radiation Oncology |
03/12/2026 | Xin Cai, M.D., Ph.D. | Physiology | Internal Medicine |
04/09/2026 | Danielle Robertson, O.D., Ph.D. | Ophthalmology |
*Please note that January’s class will be held 1/15/2026 to accommodate the academic calendar.
Manifestations and Pathogenesis of Metabolic Diseases
- Each session of this course will be devoted to a metabolic disease, with the first half of the session focused on the clinical description of the disease ("Manifestations") and the second half of the session focused on the biological mechanisms that cause the disease ("Pathogenesis")
- Both clinician-scientists and basic science researchers will serve as lecturers.
- There will be one speaker who provides the Manifestations description (45 min) and a second speaker who provides the Pathogenesis description (45 min). Thus, each pair of speakers will collectively devote 1.5 hours of their time in front of the students.
- There will be very short quizzes after each class to reinforce some of the major take-home messages (with questions to be provided by the Speakers)
- No homework. No mandatory papers to read or write. No student presentations.
- The classes will be taught live.
- Topics (lecturers) featured in Summer 2022 included Diabetes Mellitus (Ali, Bickel), Obesity (Almandoz, Williams), Genetic Forms of Obesity and Eating Disorders (Zigman, Elmquist), Lipodystrophy (Garg, Patni), Fatty Liver Disease (Kerr, Burgess), Dyslipidemia (Ahmad, Debose-Boyd), Obesity as a Risk Factor for Cancer (Huang, Scherer), and Cancer Cachexia (Iyengar, Infante).
- Topics (lecturers) featured in Summer 2023 included Hypertension (Nesbitt, Vongpatanasin), Obesity (Vinton, YJ You), Coronary Artery Disease (Joshi, Shaul), Acute Kidney Injury (Huen, Parikh), Osteoporosis (Maalouf, Towler), Epilepsy (Sirsi, Minassian), Inflammatory Bowel Disease (Fudman, Turer), and Type 1 Diabetes (Raskin, Pham).
- Topics (lecturers) featured in Summer 2024 included Inherited Inborn Errors of Metabolism (McNutt, DeBerardinis), Obesity (Vinton, Gautron), Dyslipidemia (Ahmad, Debose-Boyd), Fatty Liver Disease (Kerr, Burgess), Cancer (Cai, McBrayer), Type 2 diabetes (Ali, Bickel), Alzheimer's Disease (Ishii), and Mitochondrial Diseases (Mishra, Friedman).
Summer 2025 Schedule |
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Topic |
Mondays
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"Manifestations" Speaker |
"Pahtogenesis" Speaker |
Obesity Manifestations**
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6/2/2025 | Melissa Shoemaker, M.D. | Safia Khan, M.D. |
Obesity Pathogenesis** | 6/9/2025 | Philipp Scherer, Ph.D. | Carla Green, Ph.D. |
Sepsis/Infection | 6/16/2025 | Sarah Huen, M.D., Ph.D. | Kartik Rajagopalan, M.D., Ph.D. |
Coronary Artery Disease | 6/23/2025 | Parag Joshi, M.D. | Philip Shaul, M.D. |
No Class | 06/30/2025 | ||
Kidney Stones | 7/7/2025 | Naim Maalouf, M.D. | Orson Moe, M.D. |
Lafora Disease | 7/14/2025 | Berge Minassian, M.D. | Felix Nitschke, Ph.D. |
Inflammatory Bowel Disease | 7/21/2025 | David Fudman, M.D. | Hans-Christian Reinecker, M.D. |
Type 1 Diabetes | 7/28/2025 | Marconi Abreu, M.D. | Nam Pham, M.D., Ph.D. |
**Due to scheduling conflicts, the 1st session on obesity (June 2nd) will be about manifestations and the 2nd session (June 9th) will be about pathogenesis. Dr. Shoemaker will cover the manifestations of obesity broadly while Dr. Khan will cover the manifestations of obesity as it relates to circadian misalignment. Likewise, for the 2nd session, Dr. Scherer will cover the pathogenesis of obesity broadly while Dr. Green will cover the pathogenesis of obesity as it relates to circadian misalignment.
Metabolic Mayhem Journal Club
- This journal club was conceived at the request of the current 3MD students and is designed to give students an opportunity to read/review/discuss some key papers in metabolism, some of which were authored by UT Southwestern faculty. There will be a faculty moderator present throughout the course (Dr. Steven Wyler), however, the journal club discussions will be student led. The journal club will be held over eight one-hour sessions during the Summer 2025.
Thursdays |
PMID | Paper |
June 5, 2025 | Wang et al., Visceral Mechano-sensing Neurons Control Drosophila Feeding by Using Piezo as a Sensor. 2020, Neuron 108, 1–11. https://doi.org/10.1016/j.neuron.2020.08.017 (a study about a mechanoreceptor which is conserved from flies to humans) | |
June 12, 2025 | Tran et al., De novo and salvage purine synthesis pathways across tissues and tumors. 2024, Cell 187, 3602–3618. https://doi.org/10.1016/j.cell.2024.05.011 (a cancer paper with metabolomics and radioligand tracing experiments) | |
June 19, 2025 | No Class this Week | |
June 26, 2025 | Moya-Garzon et al., A beta-hydroxybutyrate shunt pathway generates anti-obesity ketone metabolites. 2025, Cell 188, 175–186. https://doi.org/10.1016/j.cell.2024.10.032 (a study with a nice mix of metabolomics, biochemistry and neuroscience) | |
July 3, 2025 | No Class this Week | |
July 10, 2025 | Akbari et al., Sequencing of 640,000 exomes identifies GPR75 variants associated with protection from obesity. 2021, Science 373, 73. https://doi.org/10.1126/science.abf8683 (a human exome sequencing GWAS paper) | |
July 17, 2025 | Bai et al., Enteroendocrine cell types that drive food reward and aversion. eLife 2022;11:e74964. https:// doi.org/ 10.7554/ eLife.74964 (a scRNA seq paper of enteroendocrine cells followed by chemogenetic activation of subpopulations of the cells.) | |
July 24, 2025 | Galvan et al., Development and characterization of an Sf-1-Flp mouse model. JCI Insight. 2025. https://doi.org/10.1172/jci.insight.190105. (a study that employs optogenetics and advanced genetic techniques to link VMH neuronal activity to increased muscle function) | |
July 31, 2025 | To be chosen by students in the class | |
August 7, 2025 | To be chosen by students in the class |