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Publications

  1. Danhui Liu , Chuanli Zhou , Xiaochen Wang , Zhou Luo , Ruiyao Xu , Shanshan Huo , Lina Guo , Xuemei Luo 1, Shuhan Yang , Arielle Click , Janiece Vancil , Paola Barajas , Victor Mijares , Hamid R. Baniasadi , Nan Yan 1, Jan Rehwinkel , Dustin C Hancks, Elizabeth H Chen , Shuang Liang, Zhenyu Zhong, “Nucleotide metabolic rewiring enables NLRP3 inflammasome hyperactivation in obesity” Science . 2026 Jan 15;391(6782):eadq9006. doi: 10.1126/science.adq9006. Epub 2026 Jan 15
  2. Bin Li , Jue Liang , Hamid R. Baniasadi , Margaret A Phillips , Anthony J Michael, “Spermine and thermospermine synthases emerged multiple times during eukaryote evolution” J Biol Chem . 2026 Jan;302(1):111028. doi: 10.1016/j.jbc.2025.111028. Epub 2025 Dec 9.
  3. Bin Li , Hamid R. Baniasadi , Jue Liang , Margaret A Phillips , Anthony J Michael, “New routes for spermine biosynthesis”, J Biol Chem. 2025 Apr;301(4):108390. doi: 10.1016/j.jbc.2025.108390. Epub 2025 Mar 10.
  4. Bin Li , Hamid R. Baniasadi , Margaret A Phillips , Anthony J Michael, “The Pseudomonas aeruginosa Type VI secretion system toxin Tse8 evolved from a novel N-carbamoylputrescine amidohydrolase”, Biochem J . 2025 Jul 22;482(15):999-1010. doi: 10.1042/BCJ20253210.
  5. Jose Marcos Sanches , Rajalakshmy Ayilam Ramachandran , Natalia Mussi , Hamid R. Baniasadi , Danielle M Robertson, “IL-1β-Mediated Immunometabolic Adaptation in Corneal Epithelial Cells”, J Inflamm Res . 2025 Jul 18:18:9537-9555. doi: 10.2147/JIR.S495323. eCollection 2025
  6. Rajalakshmy Ayilam Ramachandran , Rossella Titone , Joelle T Abdallah , Mahad Rehman , Mou Cao , Hamid R. Baniasadi , Danielle M Robertson, “Inhibition of Unc-51-like-kinase is mitoprotective during Pseudomonas aeruginosa infection in corneal epithelial cells” mSphere. 2025 Feb 25;10(2):e0053724. doi: 10.1128/msphere.00537-24. Epub 2025 Jan 10.
  7. Wenbi Wu , Pankaj Kumar , Chad A Brautigam , Shih-Chia Tso , Hamid R. Baniasadi , Daniel L Kober , Marie-Alda Gilles-Gonzalez, Structures of the multi-domain oxygen sensor DosP: remote control of a c-di-GMP phosphodiesterase by a regulatory PAS domain, Nat Commun. 2024 Nov 7;15(1):9653. doi: 10.1038/s41467-024-53942-7.
  8. Sabareesan Ambadi Thody, Hanna D. Clements, Hamid R. Baniasadi, Lyon, Matthew S. Sigman, Michael K. Rosen, “Small Molecule Properties Define Partitioning into Biomolecular Condensates”, Nat Chem . 2024 Nov;16(11):1794-1802
  9. Tan S, Santolaya JL, Wright TF, Liu Q, Fujikawa T, Chi S, Bergstrom CP, Lopez A, Chen Q, Vale G, McDonald JG, Schmidt A, Vo N, Kim J, Baniasadi H, Li L, Zhu G, He TC, Zhan X, Obata Y, Jin A, Jia D, Elmquist JK, Sifuentes-Dominguez L, Burstein E, “Interaction between the gut microbiota and colonic enteroendocrine cells regulates host metabolism”. Nat Metab. 2024 Jun;6(6):1076-1091.
  10. Namita Saraf, Rajalakshmy Ayilam Ramachandran, Mou Cao, Andrew Lemoff, Hamid R. Baniasadi, Danielle M Robertson, “Serum-derived extracellular vesicles for the treatment of severe ocular surface disease”, Ocul Surf. 2024 Aug 17:34:317-325.
  11. Panayotis C Theodoropoulos, Holly H Guo, Wentian Wang, Eric Crossley, Giomar Rivera Cancel, Min Fang, Thu Nguyen, Hamid R. Baniasadi, Noelle S Williams, Joseph M Ready, Jef K De Brabander, Deepak Nijhawan, “Thiophenyl Derivatives of Nicotinamide Are Metabolized by the NAD Salvage Pathway into Unnatural NAD Derivatives That Inhibit IMPDH and Are Toxic to Peripheral Nerve Cancers”, ACS Chem Biol. 2024 Jun 21;19(6):1339-1350.
  12. Bin Li, Jue Liang, Hamid R. Baniasadi, Shin Kurihara, Margaret A Phillips, Anthony J Michael, “Functional identification of bacterial spermine, thermospermine, norspermine, norspermidine, spermidine, and N1-aminopropylagmatine synthases”, J Biol Chem . 2024 May;300(5):107281.
  13. Bin Li, Jue Liang, Hamid R. Baniasadi, Margaret A. Phillips, Anthony J Michael, “Functional polyamine metabolic enzymes and pathways encoded by the virosphere”, Proc Natl Acad Sci U S A. 2023 Feb 28;120(9):e2214165120.
  14. Mayur Doke, Jay P. McLaughlin, Hamid R. Baniasadi, Thangavel Samikkannu, “Sleep Disorder and Cocaine Abuse Impact Purine and Pyrimidine Nucleotide Metabolic Signatures”, Metabolites 2022, 12, 869.
  15. Fernando H. Martins, Anubama Rajanc, Hannah E. Carterc, Hamid R. Baniasadi, Anthony W. Maresso, Vanessa Sperandio, “Interactions between Enterohemorrhagic Escherichia coli (EHEC) and Gut Commensals at the Interface of Human Colonoids”, mBio. 2022 Jun 28;13(3):e0132122.
  16. Xue J, Han Y, Baniasadi H, Zeng W, Pei J, Grishin NV, Wang J, Tu BP, Jiang Y. “TMEM120A is a coenzyme A-binding membrane protein with structural similarities to ELOVL fatty acid elongase” Elife. 2021 Aug 10; 10: e71220.
  17. Junjie Li, Diana Canseco, Yuzhu Wang, Goncalo Dias do Vale, Jaideep Chaudhary, Arnida Anwar, Hamid R. Baniasadi, Benjamin Tu, Noelle Williams, Purva Gopal, Patrick Sutphin, Jeffrey G. McDonald, William C. Putnam and Ian R. Corbin, “Assessing the Safety of Transarterial Locoregional Delivery of Low-Density Lipoprotein Docosahexaenoic Acid Nanoparticles to the Rat Liver”, Eur J Pharm Biopharm. 2021 Jan;158:273-283.
  18. Rilee D Zeinert, Hamid R. Baniasadi, Benjamin P Tu, Peter Chien, “The Lon Protease Links Nucleotide Metabolism with Proteotoxic Stress” Mol Cell. 2020 Sep 3;79(5):758-767.
  19. D. Raftery, J. Bowers, Siwie, H.R. Baniasadi “Metabolite biomarkers for the detection of liver cancer”, US Patents, Publication number: US20150133331 A1, Publication date: May 14, 2015.
  20. B. Xi, H. Gu, Hamid R. Baniasadi, Daniel Raftery, “Statistical Analysis and Modeling of Mass Spectrometry-Based Metabolomics Data” Chapter 22, Mass Spectrometry in Metabolomics, Methods in Molecular Biology Volume 1198, 2014, pp 333-353, Springer New York.
  21. H. R. Baniasadi, C. Vlahakis, J. Hazebroek, C. Zhong, V. Asiago, “The Effect of Genetics and Environment on the Metabolome of Commercial Maize Hybrids Using LC/MS: A Multisite Study” Journal of Agricultural and Food Chemistry, 2014, 62 (6), 1412-1422.
  22. Hamid R. Baniasadi, G. A. Nagana Gowda, A. Zeng, S. Zhuang, M. Maluccio, D. Raftery, “Targeted Metabolic Profiling of Hepatocellular Carcinoma and Hepatitis C using LC-MS/MS” Electrophoresis. 2013, 00, 1–8.
  23. Djukovic, Hamid R. Baniasadi, R. K, Z. Hammoud, D. Raftery, “Targeted serum metabolite profiling of nucleosides in esophageal adenocarcinoma” Rapid Communications in Mass Spectrometry. 2010, 24, 3057-3062.
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