Mishra V, Guo X, Delgado MR, Huang H. “Towards tract-specific fractional anisotropy (TSFA) at crossing-fiber regions with clinical diffusion MRI”. Magnetic Resonance in Medicine (in press).

Yu Q, Peng Y, Mishra V, Ouyang A, Li H, Zhang H, Chen M, Liu S, Huang H. “Microstructure, length, and connection of limbic tracts in normal human brain development”. Frontiers in Aging Neuroscience 2014; 6: 228. (fngi.2014.00228).

Ouyang A, Jeon T, Sunkin SM, Pletikos M, Sedmak G, Sestan N, Lein ES, Huang H. “Spatial Mapping of structural and connectional imaging data for the developing human brain with diffusion tensor imaging”. Methods (doi: 10.1016/j.ymeth.2014.10.025).

Xu F, Liu P, Pascual JM, Xiao G, Huang H, Lu H. “Acute effect of glucose on cerebral blood flow, blood oxygenation, and oxidative metabolism”. Human Brain Mapping (in press).

Liu P, Huang H, Rollins N, Jeon T, Chalak LF, Halovanic C, Lu H. “Quantitative assessment of global cerebral metabolic rate of oxygen (CMRO2) in neonates using MRI”. NMR in Biomedicine 2014; 27: 332-340.

Lein E, Miller J, Ding SL, Sunkin S, Smith K, Ng L, Szafer A, Ebbert A, Riley Z, Aiona K, Arnold J, Bennet C, Bertagnolli D, Brouner K, Butler S, Caldejon S, Carey A, Cuhaciyan C, Dalley R, Dee N, Dolbeare T, Facer B, Feng D, Fliss T, Gee G, Goldy J, Gourley L, Gregor B, Gu G, Howard R, Jochim J, Kuan C, Lau C, Lee C, Lee F, Lemon T, Lesnar P, McMurray B, Mastan N, Mosqueda N, Naluai-Cecchini T, Ngo NK, Nyhus J, Oldre A, Olson E, Parente J, Parker P, Parry S, Player A, Pletikos M, Reding M, Royall J, Roll K, Sandman D, Sarreal M, Shapouri S, Shapovalova N, Shen E, Sjoquist N, Slaughterbeck C, Smith M, Sodt A, Williams D, Zöllei L, Fischl B, Gerstein M, Geschwind D, Glass I, Hawrylycz M, Hevner R, Huang H, Jones A, Knowles J, Levitt P, Phillips J, Sestan N, Wohnoutka P, Dang C, Bernard A, Hohmann J. “Transcriptional landscape of the prenatal human brain”. Nature 2014; 508, 199-206. Cover article.

Huang H, Vasung L. “Gaining insight of fetal brain development with diffusion MRI and histology”. International Journal of Developmental Neuroscience 2014; 32, 11-22. Cover article.


Huang H, Shu N, Mishra V, Jeon T, Chalak L, Zhang Z, Rollins N, Gong G, Cheng H, Peng Y, Dong Q, He Y. "Development of human structural brain networks through infancy and childhood". Cerebral Cortex (in press).

Mishra V, Cheng H, Gong G, He Y, Dong Q, Huang H. “Differences of inter-tract correlations between neonates and children around puberty: A study based on microstructural measurements with DTI”. Frontiers in Human Neuroscience 2013; 7, 721.

Medin PM, Foster RD, van der kogel AJ, Meyer J, Sayre JW, Huang H, Oz OK. “Unexpected paralysis in a swine model suggests a tolerance constraint for single-faction irradiation of the spinal nerve”. Radiotherapy & Oncology 2013; 109, 107-111.

Tseng BY, Gundapuneedi T, Khan MA, Diaz-Arrastia R, Levine BD, Lu H, Huang H, Zhang R. “White matter integrity in physically fit older adults”. Neuroimage 2013; 82, 510-516.

Huang H, Jeon T, Sedmak G, Pletikos M, Vasung L, Xu X, Yarowsky P, Richards L, Kostovic I, Sestan N, Mori S. “Coupling diffusion imaging with histological and gene expression analysis to examine the dynamics of cortical areas across the fetal period of human brain development”. Cerebral Cortex 2013; 23 (11), 2620-2631.

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Delgado-Ayala M, Smith L, Clegg N, Huang H. "White matter biomarker of hereditary spastic paraplegia." Annals of Neurology 2012; 72, s196-s197.

Jeon T, Mishra V, Uh J, Weiner M, Hatanpaa KJ, White CL, Zhao YD, Lu H, Diaz-Arrastia-R, Huang H. "Regional changes of cortical mean diffusivities with aging and Alzheimer disease after correction of partial volume effects." NeuroImage 2012; 62, 1705-1716. PMID: 22683383.

Huang H, Gundapuneedi T, Rao U. "White matter disruptions in adolescents exposed to childhood maltreatment and vulnerability to psychopathology." Neuropsychopharmacology 2012; 37(12), 2693-2701. (Featured with Nature Press Release). PMID:21085111.

Saxena K, Tamm L, Walley A, Simmons A, Rollins N, Emslie G, Fan X, Huang H. "Corpus callosum and anterior commissure aberrations in aggressive bipolar youth." Journal of Child and Adolescent Psychopharmacology 2012; 22 (2), 112-119. PMID: 22375854; PMCID: PMC3362324.

Huang H, Fan X, Weiner M, Martin-Cook K, Xiao G, Davis J, Devous M, Rosenberg R, Diaz-Arrastia R. "Distinctive disruption patterns of white matter tracts in Alzheimer’s disease with full diffusion tensor characterization." Neurobiology of Aging 2012; 33, 2029-2045. PMID: 21872362. PMCID: PMC3227739.

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Huang H, Fan X, Williamson DE, Rao U. "White matter changes in healthy adolescents at familial risk for unipolar depression: A diffusion tensor imaging study." Neuropsychopharmacology 2011; 36, 684-691. Cover article PMID: 21085111; PMCID: PMC3036948.

Neuropsychoparmacology Cover

Huang H, Prince JL, Mishra V, Carass A, Landman B, Park DC, Tamminga C, King R, Miller MI, van Zijl PC, Mori S. “A framework on surface-based connectivity quantification for the human brain”. Journal of Neuroscience Methods 2011; 197, 324-332. PMID: 21396960; PMCID: PMC3081907.

Oishi K, Huang H, Yoshioka T, Ying S, Zee D, Zilles K, Amunts K, Woods R, Toga AW, Pike GB, Rosa-Neto P, Evans AC, van Zijl PC, Mazziotta JC, Mori S. "Superficially located white matter structures commonly seen in the human and the macaque brain with diffusion tensor imaging." Brain Connectivity 2011; 1, 37-47. PMID: 2243295.

Aslan S, Huang H, Uh J, Mishra V, Xiao G, van Osch M, Lu H. "White matter cerebral blood flow is inversely correlated with structural and functional connectivity in the human brain." NeuroImage 2011; 56, 1145-1153.PMID: 21385618; PMCID: PMC3085605.

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Vasung L, Huang H, Jovanov-Milosevic N, Pletikos M, Mori S, Kostovic I. "Development of axonal pathways in the human fetal fronto-limbic brain: histochemical characterization and diffusion tensor imaging." Journal of Anatomy 2010; 217, 400-417. PMID: 20609031.

Huang H. "Structure of the fetal brain: what we are learning from DTI." Neuroscientist 2010; 16, 634-649.

Huang H. "Delineating neural structures of developmental brains with diffusion tensor imaging." ScientificWorldJournal 2010; 10, 135-144. PMID: 20098957.

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Huang H, Xue R, Zhang J, Ren T, Richards LJ, Yarowsky P, Miller MI, Mori S. "Anatomical characterization of human fetal brain development with diffusion tensor MRI." Journal of Neuroscience 2009; 29: 4263-4273.PMID: 19339620; PMCID: PMC2721010.

Fatemi SH, Folsom TD, Reutiman TJ, Huang H, Oishi K, Mori S. "Prenatal viral infection of mice at E16 causes changes in gene expression in hippocampi of the offspring." European Neuropsychopharmacology 2009; 19: 648-653. PMID: 19501487; PMCID: PMC2716397.

Fatemi SH, Folsom TD, Reutiman TJ, Abu-Odeh D, Mori S, Huang H, Oishi K. "Abnormal expression of myelination genes and alterations in white matter fractional anisotropy following prenatal viral influenza infection at E16 in mice." Schizophrenia Research 2009; 112: 46-53.PMID: 19487109; PMCID: PMC2735410.

Hua K, Oishi K, Zhang J, Zhang W, Akhter K, Li X, Huang H, Jiang H, van Zijl PCM, Mori S. "Mapping of functional areas in the human cortex based on connectivity through association fibers." Cerebral Cortex 2009; 19: 1889-1895. PMID: 19068488; PMCID: PMC2705697.

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Huang H, Yamamoto A, Hossain MA, Younes L, Mori S. “Quantitative cortical mapping of fractional anisotropy of developing rat brains”. Journal of Neuroscience 2008; 28: 1427-1433. . PMID: 18256263; PMCID: PMC2891447.

Huang H, Ceritoglu C, Li X, Qiu A, Miller MI, van Zijl PCM, Mori S. “Correction of B0 susceptibility induced distortion in diffusion-weighted images using large-deformation diffeomorphic metric mapping”. Magnetic Resonance Imaging 2008; 26: 1294-1302. PMID: 18499384; PMCID: PMC2612638.

Fatemi SH, Reutiman TJ, Folsom TD, Huang H, Oishi K, Mori S, Smee DF, Pearce DA, Winter C, Sohr R, Juckel G. "Maternal infection leads to abnormal gene regulation and brain atrophy in mouse offspring: Implications for genesis of neurodevelopmental disorders." Schizophrenia Research 2008; 99: 56-70. PMID: 18248790; PMCID: PMC2312390.

Mori S, Oishi K, Jiang H, Jiang L, Li X, Akhter K, Hua K, Faria A, Mahmood A, Woods R, Toga A, Pike GB, Neto PR, Evans A, Zhang J, Huang H, Miller MI, van Zijl PCM, Mazziotta J. “Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template”. NeuroImage 2008; 40: 570-582. PMID: 18255316; PMCID: PMC2478641.

Baloch S, Verma R, Huang H, Khurd P, Clark S, Yarowsky P, Abel T, Mori S, Davatzikos C. "Quantification of brain maturation and growth patterns in C57BL/6J mice via computational neuroanatomy of diffusion tensor images." Cerebral Cortex 2008; 19: 675-687. PMID: 18653668; PMCID: PMC3140198.

Landman B, Huang H, Farrell J, Prince JL, Mori S. "Diffusion tensor imaging at low SNR: Non-monotonic behaviors of tensor contrasts." Magnetic Resonance Imaging 2008; 26: 790-800. PMID: 18499378; PMCID: PMC2583784.

Oishi K, Zilles K, Amunts K, Faria A, Jiang H, Li X, Akhter K, Hua K, Woods R, Toga AS, Pike GB, Rosa-Neto P, Evans A, Zhang J, Huang H, Miller MI, van Zijl PC, Mazziotta J, Mori S. "Human brain white matter atlas: Identification and assignment of common anatomical structures in superficial white matter." NeuroImage 2008; 43: 447-457. PMID: 18692144; PMCID: PMC2586008.

Pletnikov MV, Ayhan Y, Nikolskaia O, Xu Y, Ovanesov M, Huang H, Mori S, Moran TH, Ross CA. "Inducible expression of mutant human DISC1 in mice is associated with brain and behavior abnormalities reminiscent of schizophrenia." Molecular Psychiatry 2008; 13: 173-186. PMID: 17848917.

Pletnikov MV, Ayhan Y, Xu Y, Nikolskaia O, Ovanesov M, Huang H, Mori S, Moran TH, Ross CA. "Enlargement of the lateral ventricles in mutant DISC1 transgenic mice." Molecular Psychiatry 2008; 13: 115. PMID: 18202691.

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2007 and Earlier

Zhang J, Evans A, Hermoye L, Lee SK, Wakana S, Zhang W, Donohue P, Miller MI, Huang H, Wang X, van Zijl PCM, Mori S. "Evidence of slow maturation of the superior longitudinal fasciculus in early childhood by diffusion tensor imaging." NeuroImage 2007; 38: 239-247. PMID: 17826183; PMCID: PMC2694744.

Huang H, Zhang J, Wakana S, Zhang W, Ren T, Richards LJ, Yarowsky P, Donohue P, Graham E, van Zijl PCM, Mori S. "White and gray matter development in human fetal, newborn and pediatric brains." NeuroImage 2006; 33: 27-38. Cover article. PMID: 16905335.

Ren T, Anderson A, Shen W, Huang H, Plachez C, Mori S, Kinsman SL, Richards L. "Imaging, Anatomical and Molecular Analysis of Callosal Formation in the Developing Human Fetal Brain." Anatomical Recor d 2006; 288A: 191-204. PMID: 16411247.

Dubey P, Fatemi A, Huang H, Nagae-Poetscher L, Wakana S, van Zijl PCM, Moser HW, Mori S, Raymond GV. "Diffusion tensor-based imaging reveals occult abnormalities in adrenomyeloneuropathy." Annals of Neurology 2005; 58: 758-766. PMID: 16240348.

Huang H, Zhang J, Jiang H, Wakana S, Poetscher L, Miller MI, van Zijl PCM, Hillis AE, Wytik R, Mori S. "DTI Tractography based Parcellation of White Matter: Application to the Mid-sagittal Morphology of Corpus Callosum."NeuroImage 2005; 26: 195-205. PMID: 15862219.

Huang H, Zhang J, van Zijl PCM, Mori S. "Analysis of Noise Effects on DTI-based Tractography Using the Brute-Force and Multi-ROI Approach." Magnetic Resonance in Medicine 2004; 52: 559-565. PMID: 15334575.

Zhang J, Richards LJ, Yarowsky P, Huang H, Mori S. "Three-Dimensional Anatomical Characterization of the Developing Mouse Brain by Diffusion Tensor Microimaging." NeuroImage 2003; 20: 1639-1648. PMID: 14642474.

Huang H, Wen GB. "A New Unsteady Three Dimensional Model for Macromolecular Transport and Water Filtration across the Arterial Wall." Applied Mathematics and Mechanics 2001; 22: 1155-1172.

Wang X, Huang H, Wen GB. "The Calculation of Transport for Curved Tubes with Permeable Arterial Wall." Acta Scientiarum Naturalium Universitatis Pekinensi s 2001; 37: 658-668.

Huang H, Zhang L, Liu H. "Window95-based System for Analysis of the Synaptic Numeral Density." Chinese Journal of Stereology and Image Analysis 1999; 4: 80-85.

Zhang L, Mai H, Nan Y, Huang H. "Counting of the Numerical Density of Synapses of Using the Dissector Technique". Chinese Journal of Neuroanatomy 1998; 14: 411-414.

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