Publications for Murat Can Çobanoğlu, Ph.D.


Wise*, A. and Cobanoglu*, M. C. Predicting Targeted Cancer Therapeutics. bioRxiv 057901.


Cobanoglu, M. C., Oltvai, Z. N., Taylor, D. L. and Bahar, I. BalestraWeb: efficient online evaluation of drug-target interactions. Bioinformatics 31, 131–133.

Cheng M. H., Block E., Hu F., Cobanoglu M. C., Sorkin A. and Bahar I. Insights into the Modulation of Dopamine Transporter Function by Amphetamine, Orphenadrine, and Cocaine Binding. Front. Neurol. 6, 134 (2015).


O'Reilly* L. P., Long* O. S., Cobanoglu* M. C., Benson J. A., Luke C. J., Miedel M. T., Hale P., Perlmutter D. H., Bahar I., Silverman G. A. and Pak S. C. A genome-wide RNAi screen identifies potential drug targets in a C. elegans model of α1-antitrypsin deficiency. Hum. Mol. Genet. 23, 5123–5132.


Cobanoglu, M. C., Liu, C., Hu, F., Oltvai, Z. N. and Bahar, I. Predicting drug-target interactions using probabilistic matrix factorization. J. Chem. Inf. Model. 53, 3399–3409.

Cayli, M., Cobanoglu, M. C. and Balcisoy, S. GlyphLink: An interactive visualization approach for semantic graphs. Journal of Visual Languages and Computing 24, 463–471.


Kim H., Bernard M. E., Farkas A., Goff J., Kalash R., Houghton F., Shields D., Franicola D., Dixon T., Zhang X., Epperly M., Wang H., Cobanoglu M. C., Greenberger J. S., Ionizing irradiation protection and mitigation of murine cells by carbamazepine is p53 and autophagy independent. In Vivo 26, 341–354.


Cobanoglu, M. C., Saygin, Y. and Sezerman, U. Classification of GPCRs using family specific motifs. IEEE/ACM Trans. Comput. Biol. Bioinform. 8, 1495–1508.


Cobanoglu, M. C., Sezerman, U. and Karabulut, N. P. Determining the ligand-specific regions of peptide-binding G-Protein Coupled Receptors. in Health Informatics and Bioinformatics (HIBIT), 2010 5th International Symposium on 211–213 (2010).


Cobanoglu, M. C., Kindiroglu, A. A. and Balcisoy, S. Comparison of mobile device navigation information display alternatives from the cognitive load perspective. in International Conference on Engineering Psychology and Cognitive Ergonomics 149–157 (2009).